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While prealigned data can be loaded directly, SpaMTP also provides two functions that allow for the manual alignment (AlignSpatialOmics) and mapping (MapSpatialOmics) of spatial multiomics data to the same common coordinate system (Fig

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Schlwicke Engstrm K, Strmberg U, Lundh T, Johansson I, Vessby B, Hallmans G, Skerfving S, Broberg K